[Bioc-devel] xps build problem on toluca2

Obenchain, Valerie Valerie.Obenchain at roswellpark.org
Fri Jan 27 15:46:38 CET 2017

Hi Christian,

toluca2 is in the process of being set up and oaxaca is still the
official Mac devel builder. There are a number of dependencies that need
to be addressed on the new machine and we are working through them.

It is important to understand that the error on toluca2 does not affect
you or your users in any way. Binaries are propagated from oaxaca, not
toluca2. Also, there are still no Mac binaries on CRAN for R 3.4. This
means Bioc devel users on Mac need to install from source so they aren't
concerned with the binaries at all.

It may be confusing seeing build results for both Mac devel builders -
internally we are tracking toluca2 but the one you need to watch is
oaxaca. I don't think we announced this and maybe we should have to
clarify what was going on. We will post on the mailing lists when
toluca2 officially replaces oaxaca and at that point you'll only see
toluca2 on the build report.


On 01/26/2017 10:08 AM, cstrato wrote:
> Dear all,
> Since Dan, who was always very helpful and took care of the special 
> requirements of my package 'xps', is no longer part of the BioC group, 
> and I do not know who is currently responsible for the BioC servers, I 
> am writing to you to inform you of the problem building 'xps' on the new 
> Mac server 'toluca2':
> http://bioconductor.org/checkResults/devel/bioc-LATEST/xps/toluca2-buildsrc.html
> Could you please install ROOT on toluca2 to prevent the build error of 
> 'xps'.
> Since both, toluca2 and oaxaca, are running Mac OS X Mavericks, it 
> should be no problem to transfer ROOT and the corresponding settings to 
> toluca2.
> Thank you in advance.
> Best regards,
> Christian
> _._._._._._._._._._._._._._._._._._
> C.h.r.i.s.t.i.a.n   S.t.r.a.t.o.w.a
> V.i.e.n.n.a           A.u.s.t.r.i.a
> e.m.a.i.l:        cstrato at aon.at
> _._._._._._._._._._._._._._._._._._
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