[Bioc-devel] Updating package

Charles Determan cdetermanjr at gmail.com
Thu Jan 5 16:47:06 CET 2017

That seems to have been the issue.  It had been some time since I needed to
commit to bioconductor I forgot my username was different.  Thank you
Martin for pointing that simple problem out.  I have now 'dcommit' my
'devel' branch so if I understand correctly the changes should be with
bioconductor to apply accordingly.


On Thu, Jan 5, 2017 at 9:22 AM, Martin Morgan <martin.morgan at roswellpark.org
> wrote:

> On 01/05/2017 10:18 AM, Charles Determan wrote:
>> Not to be pushy but did anyone have any insights with this?  I would hate
>> to have my package still sitting with the bug fix it requires.
> maybe svn credentials,
>  git svn rebase --username=c.determan
> ??
>> Thanks,
>> Charles
>> On Wed, Jan 4, 2017 at 11:15 AM, Charles Determan <cdetermanjr at gmail.com>
>> wrote:
>> Hi,
>>> I received a notification that my package was failing some tests.  I have
>>> since made the necessary fixes and pushed my changes to the github repo.
>>> Previously this would result in http://gitsvn.bioconductor.
>>> org/git-push-hook updating the package for bioconductor.  I noticed
>>> however that this delivery fails and that the git-svn bridge is no longer
>>> available.
>>> How should I modify my current repository to update my package
>>> accordingly?
>>> I have my local changes in the 'devel' branch.
>>> I ran the update_ remotes.sh
>>> I run 'git svn rebase' but I get the following error:
>>> Can't create session: Unable to connect to a repository at URL '
>>> https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/OmicsMarkeR
>>> ':
>>> Unexpected server error 500 'Internal Server Error' on
>>> '/bioconductor/trunk/madman/Rpacks/OmicsMarkeR' at
>>> /mingw64/share/perl5/site_perl/Git/SVN.pm line 717.
>>> What did I miss here?
>>> Thanks,
>>> Charles
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