[Bioc-devel] Question about using R-devel

Aimin Yan aimin.at.work at gmail.com
Thu Feb 23 23:22:31 CET 2017


When I used R-devel to perform R CMD build on my package, I got the
following errors.

Actually, I put
^packrat/
in PathwaySplice/.Rbuildignore.

Does anyone has idea on this error?

Thank you,

Aimin


cp: PathwaySplice/packrat/lib-R/boot: No such file or directory
cp: PathwaySplice/packrat/lib-R/class: No such file or directory
cp: PathwaySplice/packrat/lib-R/codetools: No such file or directory
cp: PathwaySplice/packrat/lib-R/compiler: No such file or directory
cp: PathwaySplice/packrat/lib-R/datasets: No such file or directory
cp: PathwaySplice/packrat/lib-R/graphics: No such file or directory
cp: PathwaySplice/packrat/lib-R/grDevices: No such file or directory
cp: PathwaySplice/packrat/lib-R/grid: No such file or directory
cp: PathwaySplice/packrat/lib-R/KernSmooth: No such file or directory
cp: PathwaySplice/packrat/lib-R/MASS: No such file or directory
cp: PathwaySplice/packrat/lib-R/methods: No such file or directory
cp: PathwaySplice/packrat/lib-R/nnet: No such file or directory
cp: PathwaySplice/packrat/lib-R/parallel: No such file or directory
cp: PathwaySplice/packrat/lib-R/rpart: No such file or directory
cp: PathwaySplice/packrat/lib-R/spatial: No such file or directory
cp: PathwaySplice/packrat/lib-R/splines: No such file or directory
cp: PathwaySplice/packrat/lib-R/stats: No such file or directory
cp: PathwaySplice/packrat/lib-R/stats4: No such file or directory
cp: PathwaySplice/packrat/lib-R/tcltk: No such file or directory
cp: PathwaySplice/packrat/lib-R/tools: No such file or directory
cp: PathwaySplice/packrat/lib-R/utils: No such file or directory
 ERROR
copying to build directory failed
Error: Command failed (1)
In addition: Warning message:
`cleanup` is deprecated
Execution halted

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