[Bioc-devel] GenomeInfoDb::Seqinfo() failing with 404 error
rcavalca at umich.edu
Wed Feb 1 13:39:10 CET 2017
I was wondering if any progress has been made on fixing this? I looked through recent commits for GenomeInfoDb, but there didn't seem to be anything related to this problem.
> On Jan 25, 2017, at 23:01, Obenchain, Valerie <Valerie.Obenchain at RoswellPark.org> wrote:
> Thanks for the report. It looks like the directory structure has
> changed. I'll work on this tomorrow and will post back when it's fixed.
>> On 01/25/2017 06:29 PM, Raymond Cavalcante wrote:
>> I'm suddenly encountering errors with GenomeInfoDb::Seqinfo():
>>> Error in file(file, "rt") : cannot open connection
>>> In addition: Warning message:
>>> In file(file, "rt") :
>>> URL 'https://ftp.ncbi.nlm.nih.gov/genomes/ASSEMBLY_REPORTS/All/GCF_000001405.13.assembly.txt': status was '404 Not Found'
>> I'm not sure how to fix this issue, as it seems to be more of an NCBI problem. Any help would be greatly appreciated.
>> Raymond Cavalcante
>> Bioc-devel at r-project.org mailing list
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