[Bioc-devel] Vignette update after change in git mirror repo
mas29 at sfu.ca
Mon Apr 24 03:29:17 CEST 2017
Thanks, Hervé. Very strange, when I checked that link earlier today, it
appeared to still have errors. All good now!
On Sun, Apr 23, 2017 at 4:49 PM, Hervé Pagès <hpages at fredhutch.org> wrote:
> Hi Maia,
> On 04/23/2017 10:09 AM, Maia Smith wrote:
>> Just an update - the checked in code is passing R CMD check on my computer
>> (no errors, 1 warning), and has a version bump from 0.99.9 to 0.99.10, but
>> I still haven't seen a build attempt on bioconductor since I committed the
>> code a few days ago.
> Not sure where you are looking at or what you mean exactly by "build
> attempt" but, unless our build system is down, every Bioconductor
> software package gets built and checked every day. timescape is no
> I'm a bit worried because I know the release is
>> occurring tomorrow...
>> On Sat, Apr 22, 2017 at 3:34 PM, Maia Smith <mas29 at sfu.ca> wrote:
>> Thank you, Sean and James! I think this fixed the problem, Sean - will
>>> know when the build is finished today. MUCH appreciated.
>>> On Fri, Apr 21, 2017 at 4:13 PM, Sean Davis <seandavi at gmail.com> wrote:
>>> Sorry I lead you astray, earlier, Maia.
>>>> In general, you do not need to install the package in the vignette. The
>>>> first code block in the vignette where you did "eval=FALSE" is the way
>>>> go. The second code block where you actually do the installation is
>>>> unnecessary. The package is installed by R in order to build the
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>> Bioc-devel at r-project.org mailing list
> Hervé Pagès
> Program in Computational Biology
> Division of Public Health Sciences
> Fred Hutchinson Cancer Research Center
> 1100 Fairview Ave. N, M1-B514
> P.O. Box 19024
> Seattle, WA 98109-1024
> E-mail: hpages at fredhutch.org
> Phone: (206) 667-5791
> Fax: (206) 667-1319
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