[Bioc-devel] Error in tokay2
Obenchain, Valerie
Valerie.Obenchain at RoswellPark.org
Fri Apr 14 18:15:41 CEST 2017
Hi Juan Pablo,
We think this is a problem related to installed.packages(), see
discussion here:
https://stat.ethz.ch/pipermail/bioc-devel/2017-April/010819.html
You can ignore this for now. Thanks for keeping an eye on the build report.
Valerie
On 04/14/2017 12:41 AM, Romero, Juan Pablo wrote:
> Hello all,
>
>
> I know that today is the deadline for passing R CMD build and R CMD check without errors and warnings, and my package EventPointer has been working perfectly for the last weeks.
>
>
> Today the build report in tokay2 shows an error in one of the examples:
>
>
> ** running examples for arch 'x64' ... ERROR
>
>
> Make the TxDb object ... Error in if (file.exists(dest) && file.mtime(dest) > file.mtime(lib) && :
> missing value where TRUE/FALSE needed
>
>
> The error is coming from the function makeTxDbFromGFF and the error does not come from functions from
>
> my package.
>
>
> Is anybody having a similar error?
>
>
> I will appreciate any help on this to avoid problems related with adding the package to the new release.
>
>
> Thanks!
>
>
> Best regards,
>
>
> Juan Pablo
>
>
> [[alternative HTML version deleted]]
>
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