[Bioc-devel] Installing EBImage with custom packages dir?
Lori.Shepherd at RoswellPark.org
Tue Apr 11 14:32:06 CEST 2017
You can always use biocLite(pkg , lib="path/to/library") . The lib path in biocLite defaults to the .libPaths(). When you do .libPaths() upon opening R does your path appear that you set with the environment variables?
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Guillaume MULLER <gm at presans.com>
Sent: Tuesday, April 11, 2017 8:28:34 AM
To: Shepherd, Lori; bioc-devel at r-project.org
Subject: Re: [Bioc-devel] Installing EBImage with custom packages dir?
Thanks for your answer.
The R_LIBS and R_LIBS_USER environment variables are already set in my ~/.Renviron . They point to the correct location. But this latter is not selected when installing packages with biocLite()...
Guillaume MULLER, PhD
PRESANS - Remix Coworking - L'Appart
57 rue de Turbigo
This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.
[[alternative HTML version deleted]]
More information about the Bioc-devel