[Bioc-devel] R package with using rjava and java libraries exceeding the allowed size limit

[Eugenia Galeota]

Hi all,

I’m developing a package that uses some java libraries through rJava. The
java libraries that I have compiled from source to create a single jar file
with dependencies (size 85M) that exceeds the maximum size allowed for
bioconductor packages. I noticed that in CRAN there is another package
OpenNLP https://cran.r-project.org/web/packages/openNLP/index.html using
rJava where the JAR files are imported through a data package
https://cran.r-project.org/web/packages/openNLPdata/index.html. Do you
think it is possible to use a similar approach for a Bioconductor package?
Have you any idea about possible alternatives? Thanks in advance,


Eugenia

-- 
Eugenia Galeota, PhD
Center for Genomic Science of IIT at SEMM
Computational Epigenomics
Email: eugenia.galeota at iit.it
Tel: +39 02 9437 5046
Via Adamello 16, 20139 Milan, Italy

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