[Bioc-devel] [Bioc-degel] AnnotationHub needed in the description of the ExperimentHubData

Marcin Kosiński m.p.kosinski at gmail.com
Wed Nov 30 18:52:03 CET 2016


Hi bioc devs!

In this manual about creeating ExperimentHubData package
http://www.bioconductor.org/packages/3.4/bioc/vignettes/ExperimentHubData/inst/doc/ExperimentHubData.html
there is a suggestion to create a zzz.R file where `query` function is used.

This function comes from AnnotationHub package, so there somewhere someone
should add an information about adding AnnotationHub to Imports in
DESCRIPTION and about importing query from AnnotationHub in NAMESPACE.
Without that the CRAN CHECK results in `query is an undocumented object or
function`. What is more, I even had to add importFrom(utils, read.csv) to
the NAMESPACE, just from that reason :)

Cheers!
Marcin

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