[Bioc-devel] What are the differences between Bioc Views: MethylSeq, DNAMethylation and DifferentialMethylation

[Marcin Kosiński]

Links to those Bioc Views:

   - http://bioconductor.org/packages/devel/BiocViews.html#___MethylSeq
   - http://bioconductor.org/packages/devel/BiocViews.html#___DNAMethylation
   -
   http://bioconductor.org/packages/devel/BiocViews.html#___DifferentialMethylation


2016-11-03 16:56 GMT+01:00 Marcin Kosiński <m.p.kosinski at gmail.com>:

> Dear Bioc devs,
>
> I am looking for a tool to jointly analyze methylation and expression data
> from TCGA.
>
> As I haven't earlier used R for finding differentially methylated bases or
> regions I thought Bioc Views would be a great start to look for the tool to
> analyze the methylation data.
>
> I am wondering: what are differences in those 3 Bioc Views: *MethylSeq,
> DNAMethylation and DifferentialMethylation*. Aren't they all created to
> list packages that aims to manage, analyze and visualize methylation
> datasets? Can't there be one Bioc View called `Methylation`?
>
> Thanks for the response and the indulgence,
> Marcin
>

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