[Bioc-devel] A handful of check to follow up on R CMD BiocCheck

Martin Morgan martin.morgan at roswellpark.org
Wed Nov 2 20:17:56 CET 2016


On 11/02/2016 02:49 PM, Kevin RUE wrote:
> Dear all,
>
> Just thought I'd share a handful of scripts that I wrote to follow up on
> certain NOTE messages thrown by R CMD BiocCheck.
>
> https://github.com/kevinrue/BiocCheckTools
>
> They're very simple, but I occasionally find them quite convenient.
> Apologies if something similar already exists somewhere :)

Maybe consider creating a diff against the source code that, e.g., 
reported the first 6 offenders? The relevant lines are near

https://github.com/Bioconductor-mirror/BiocCheck/blob/master/R/checks.R#L1081

Martin

>
> All the best,
> Kevin
>
> 	[[alternative HTML version deleted]]
>
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