[Bioc-devel] ExperimentHub::GSE62944 outdated

[Marini, Federico]

Hi Valerie,

This is true. I also did the same thing for the normal samples, this as well already as SummarizedExperiment.

I can check in my scripts once I am back in the office, if you want to use it as a starter.

Cheers,
Federico

________________________________________
From: Obenchain, Valerie <Valerie.Obenchain at RoswellPark.org>
Sent: Friday, June 3, 2016 5:28 PM
To: Ludwig Geistlinger; bioc-devel at r-project.org
Cc: Marini, Federico; Sonali Arora
Subject: Re: [Bioc-devel] ExperimentHub::GSE62944 outdated

Hi Ludwig and Federico,

Yes, we plan to update these data in the next couple of weeks.

Sonali mentioned that the current data only include the tumor samples
and she'd like to add the normals. The new data will likely be added as
SummarizedExperiment objects instead of ExpressionSets.

Valerie


On 06/03/2016 04:57 AM, Ludwig Geistlinger wrote:
> FYI
>
> That works for me, but maybe this is also of interest for others, so I
> wonder if somebody of the Bioc annotation/experiment team (Sonali,
> Valerie, Martin?) could update this accordingly for ExperimentHub?
>
> Best,
> Ludwig
>



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