[Bioc-devel] Access check.log file after error

Hervé Pagès hpages at fredhutch.org
Wed Nov 11 21:38:30 CET 2015


Hi,

We already display the details of RUnit-based tests (Dan added this a
long time ago). See for example:

 
http://bioconductor.org/checkResults/3.3/bioc-LATEST/GenomicFeatures/zin2-checksrc.html

There is no reason to not do it for testthat-based tests too.

H.

On 11/11/2015 10:09 AM, Blattmann  Peter wrote:
> Thank you for all the answers and that is great to get the rest of the error output.
>
> Just to clarify, is there a way for me to retrieve myself the file /Users/biocbuild/bbs-3.3-bioc/meat/SWATH2stats.Rcheck/tests/test-all.Rout.fail on morelia (and similar on zin2) that Brian just sent me, or not? If yes, how can I access this?
> Thanks again a lot for your help and the great support, that solved the problem!
>
> __________________________________________
>
> ETH Zurich
> Dr. Peter Blattmann
> Institute of Molecular Systems Biology
> Aebersold group
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-- 
Hervé Pagès

Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
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