[Bioc-devel] Gviz: GeneRegionTrack from EnsDb objects

Hahne, Florian florian.hahne at novartis.com
Wed Nov 4 16:37:34 CET 2015


Hi Johannes,
Great! This is really useful and something I wanted to do since a while.
I am doing all of my development on the svn repository. Not sure about the
githup clone. 
If you want to you can just send the files you changes by mail and I will
take a look at the diff.
FLorian

On 04/11/15 15:55, "Rainer Johannes" <Johannes.Rainer at eurac.edu> wrote:

>Dear Florian,
>
>I¹ve forked the (Bioconductor-mirror) Gviz repository on github and added
>support to create GeneRegionTracks from EnsDb objects. It works
>analogously to GeneRegionTracks from TxDb, but provides in addition gene
>or tx biotypes, gene names and gene models of all (not only protein
>coding) genes from Ensembl.
>
>The problem now is that I can not make a pull request on that repository,
>as it is read-onlyŠ is there an alternative way I could provide the code
>for you for evaluation?
>
>cheers, jo



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