[Bioc-devel] FEM package updation build frequence

Dan Tenenbaum dtenenba at fredhutch.org
Wed Mar 18 06:54:00 CET 2015



----- Original Message -----
> From: "Yinming Jiao" <20907099 at zju.edu.cn>
> To: "Dan Tenenbaum" <dtenenba at fredhutch.org>
> Cc: bioc-devel at r-project.org, "Andrew Teschendorff" <andrew at picb.ac.cn>
> Sent: Tuesday, March 17, 2015 10:29:16 PM
> Subject: Re: Re: [Bioc-devel] FEM package updation build frequence
> 
> Dear Dan
> 
> Your reply is really exiting. Here I change the version number 2.0.1
> to 2.1.2. As you say, I have bumped to version 2.0.1 but according
> to our guidelines
> (http://bioconductor.org/developers/how-to/version-numbering/) it
> should be 2.1.0. That is, the y in the x.y.z version number should
> always be odd in devel and even in release. Now z is bumped to 2
> from 1 which is needed to be added to the repository.
> 

No, it's not needed to be added to the repository. It is already in the repository.



> Whether this means that the one with right version number will be
> built again and published on the Bioconductor web site tomorrow.
> 
> So,after then, could FEM 2.2.0(which needed to be bumped in release)
> be included in the new BioC release on April 19.


Yes, FEM will be included in the new release. It will be automatically bumped (you do not have to do anything) to 2.2.0.

Dan



> 
> Thanks again for your help.
> 
> Kind Regards
> Yinming
> 
> > -----原始邮件-----
> > 发件人: "Dan Tenenbaum" <dtenenba at fredhutch.org>
> > 发送时间: 2015年3月18日 星期三
> > 收件人: "Yinming Jiao" <20907099 at zju.edu.cn>
> > 抄送: bioc-devel <bioc-devel at r-project.org>
> > 主题: Re: [Bioc-devel] FEM package updation build frequence
> > 
> > Hi,
> > 
> > 
> > 
> > ----- Original Message -----
> > > From: "Yinming Jiao" <20907099 at zju.edu.cn>
> > > To: "bioc-devel" <bioc-devel at r-project.org>
> > > Sent: Tuesday, March 17, 2015 7:52:20 AM
> > > Subject: [Bioc-devel] FEM package updation build frequence
> > > 
> > > Hi Guys
> > > 
> > > As a maintainer of FEM BioC package, a new FEM version(2.0.1,
> > > previous 1.1.0,  z in the version number x.y.z is also  bumped)
> > >  is
> > > submitted to our SVN server last Sunday.It was built once on
> > > Monday,
> > > but it has an error. Then I resubmitted it.
> > > 
> > > In the following link http://bioconductor.org/checkResults/ ,so
> > >  how
> > > often are the packages built and checked.
> > > 
> > > And, after the package passes the check test, When will it be
> > > published on bioconductor.org website?
> > > 
> > 
> 
> > (The Mavericks version isn't updated yet because the Mavericks
> > machine did not complete the build last night due to an unrelated
> > issue).
> > 
> > You might have been expecting to see the update at
> > 
> > http://bioconductor.org/packages/release/bioc/html/
> > 
> > But it's not there. Bioconductor has two branches, release and
> > devel. devel is for active development of packages. The only
> > commits you should make to release are bug fixes and documentation
> > enhancements.
> > 
> > The next release will be on April 17 and after that, devel will
> > become release.
> > 
> > Incidentally, you bumped to version 2.0.1 but according to our
> > guidelines
> > (http://bioconductor.org/developers/how-to/version-numbering/) it
> > should be 2.1.0. That is, the y in the x.y.z version number should
> > always be odd in devel and even in release.
> > 
> > Dan
> > 
> > 
> > 
> > > Thanks so much for your attention on our FEM package welcome to
> > > play
> > > with it.
> > > 
> > 
> > 
> > 
> > > Really thanks for  your help.
> > > 
> > > Kind Regards
> > > 
> > > Yinming
> > > 
> > > _______________________________________________
> > > Bioc-devel at r-project.org mailing list
> > > https://stat.ethz.ch/mailman/listinfo/bioc-devel
> > > 
> 
> 
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> 320 Yue Yang Road
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> Email: 20907099 at zju.edu.cn or jiaoyinming at picb.ac.cn
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