[Bioc-devel] New(ish!) Seattle Bioconductor team member
stvjc at channing.harvard.edu
Thu Mar 5 10:54:02 CET 2015
I second the welcomings. And I am quite interested in covr, but I wonder
what we have
to do to get it to work with the RUnit-based conventions that we've
followed so far,
with [basefolder]/tests and [basefolder]/inst/unitTests?
On Wed, Mar 4, 2015 at 6:03 PM, Henrik Bengtsson <hb at biostat.ucsf.edu>
> On Wed, Mar 4, 2015 at 2:29 PM, Michael Lawrence
> <lawrence.michael at gene.com> wrote:
> > Welcome.
> > For those who don't know, Jim is also the author of the neat "lintr"
> > package, which checks your R code as you type, across multiple editors.
> > https://github.com/jimhester/lintr
> Not to mention https://github.com/jimhester/covr - It only took me one
> round of 'covr' to become a test-coverage-oholic.
> Jim, great to have you on board.
> > Michael
> > On Wed, Mar 4, 2015 at 2:20 PM, Martin Morgan <mtmorgan at fredhutch.org>
> > wrote:
> >> Let me take this belated opportunity to introduce Jim Hester <
> >> jhester at fredhutch.org> to the Bioconductor developer community.
> >> Jim is working in the short term on SummarizedExperiment, including the
> >> refactoring efforts he introduced yesterday as well as coercion methods
> >> and from ExpressionSet (an initial version from ExpressionSet to
> >> SummarizedExperiment is available in the development version
> >> iterations will include coercion in the reverse direction as well as
> >> perhaps more 'clever' mapping between the probeset or gene names of
> >> ExpressionSet and relevant range-based notation). Jim will also
> >> to ongoing project activities like new package reviews, package
> >> maintenance, and upcoming release activities.
> >> Jim brings a lot of interesting biological and software development
> >> experience to the project. Say hi when you have a chance!
> >> Martin
> >> --
> >> Computational Biology / Fred Hutchinson Cancer Research Center
> >> 1100 Fairview Ave. N.
> >> PO Box 19024 Seattle, WA 98109
> >> Location: Arnold Building M1 B861
> >> Phone: (206) 667-2793
> >> _______________________________________________
> >> Bioc-devel at r-project.org mailing list
> >> https://stat.ethz.ch/mailman/listinfo/bioc-devel
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> > https://stat.ethz.ch/mailman/listinfo/bioc-devel
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