[Bioc-devel] Warning: no visible global function definition for ‘seqlevels<-’

Morgan, Martin Martin.Morgan at roswellpark.org
Wed Dec 23 05:55:00 CET 2015


Yes, that's right, either 

  import(GenomeInfoDb)

or

  importFrom(GenomeInfoDb, "seqlevels<-")

Martin

________________________________________
From: Bioc-devel [bioc-devel-bounces at r-project.org] on behalf of Venkat Malladi [Venkat.Malladi at utsouthwestern.edu]
Sent: Tuesday, December 22, 2015 3:19 PM
To: bioc-devel at r-project.org
Subject: [Bioc-devel] Warning: no visible global function definition for   ‘seqlevels<-’

Hi,

I have the recently got this warning in my package

combineTranscripts: no visible global function definition for �seqlevels<-�

How would I fix this warning, when building my package. One of my packages calls the function seqlevels. I think if I explicilty import GenomeInfoDb in my NAMESPACE file it should fix this issue right?

Thanks for the help.

Venkat


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