[Bioc-devel] namespace 'GenomeInfoDb' is not available

Chenglin Liu cliu at sjtu.edu.cn
Thu Apr 30 05:10:57 CEST 2015 

Dear all,

 

I am trying to develop a new package. Everything goes fine on Linux and Mac.
However, when I do 

 

R CMD Check on Windows, there are a lot of warnings about 
 
"namespace 'GenomeInfoDb' is not available and has been replaced by
.GlobalEnv when processing object ''. 
 
Could anyone can help me about that?

 

Thank you in advance.

 

Installing package prior to check...
 
 
install for i386
 
* installing *source* package 'OperaMate' ...
** R
** data
** inst
** preparing package for lazy loading
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
 
install for x64
 
* installing *source* package 'OperaMate' ...
** testing if installed package can be loaded
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
Warning: namespace 'GenomeInfoDb' is not available and has been replaced
by .GlobalEnv when processing object ''
* MD5 sums
packaged installation of 'OperaMate' as OperaMate_0.99.5.zip
* DONE (OperaMate)

 

 

 

Ashley


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