[Bioc-devel] Announcing a new package: ggtree

Yu, Guangchuang gcyu at connect.hku.hk
Fri Apr 10 08:30:07 CEST 2015

Dear all,

My package, ggtree, for visualizing phylogenetic tree will be released in
BioC 3.1. It's not a simple tree viewer. The design of this package is to
facilitate adding different types of annotation in multiple layers.

Internally, it supports parsing output from BEAST, PAML, HYPHY, EPA and
pplacer. It takes all the good parts of ggplot2 and allowing general
flexibilities of annotating phylogenetic with diverse user inputs.

Please refer to the vignette,
to find out more.

Best Regards,
Guangchuang Yu, PhD Candidate
State Key Laboratory of Emerging Infectious Diseases
School of Public Health
The University of Hong Kong
Hong Kong SAR, China
www: http://ygc.name

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