[Bioc-devel] plotPCA for BiocGenerics

Michael Love michaelisaiahlove at gmail.com
Mon Oct 20 20:54:27 CEST 2014


I agree it depends on programming style. But to continue with the example,
it would have to be:

plot(as.mySpecialObjectPCA(mySpecialObject))

because we have many packages here with their own functions.

Wouldn't this just proliferate the number of classes instead of functions?
For every type of plot in my package, I would have to add a special class
branching off of mySpecialObject. Users would have to remember to convert
from mySpecialObject to mySpecialObjectPCA or mySpecialObjectMAPlot or
mySpecialObjectVarianceMeanPlot, etc.

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