[Bioc-devel] BiocCheck

[Dan Tenenbaum]

----- Original Message -----
> From: "Kasper Daniel Hansen" <kasperdanielhansen at gmail.com>
> To: bioc-devel at r-project.org
> Sent: Wednesday, May 28, 2014 7:20:00 AM
> Subject: [Bioc-devel] BiocCheck
> 
> 1) The hash bang in the BiocCheck script currently requires
> intervention at
> install time.
> 
> It would be much more convenient if the script could read of the
> location
> of R, in the same way as (say) the Sweave script can.  In fact, I
> modified
> the BiocCheck script as per the Sweave script but ran into problems
> with
> .BiocCheckFromCommandLine, and figured I better stop.

I've addressed this in BiocCheck 1.1.4. I just missed the build system cutoff for tonight's builds so this will be available on Sunday via biocLite().

> 
> 2) Re. the checks for coding style: it would be convenient if there
> was an
> option (perhaps disabled by default, perhaps not) which lists the
> offending
> files for each "issue".

Still haven't gotten to this yet.

Dan


> 
> Best,
> Kasper
> 
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> 
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