mtmorgan at fhcrc.org
Mon Sep 16 21:53:11 CEST 2013
On 09/15/2013 07:12 AM, Wolfgang Huber wrote:
> Dear Julian
> Since this has come up here and elsewhere, and since the next Bioc release is coming up, let's remind ourselves that we should make development against 3.0.1 Patched (2013-09-03 r63824) -- "Good Sport".
> Martin - should this be noted on http://www.bioconductor.org/developers/release-schedule ?
> Not sure what relevance this has in practice, but it seems wise to eliminate unnecessary variables.
Thanks, the release notes have been updated. A short post to Bioc-devel with
some additional pertinent information is forthcoming.
> Best wishes
> On Sep 15, 2013, at 4:01 pm, Julian Gehring <julian.gehring at embl.de> wrote:
>> calling 'head' or 'tail' on a 'RangedData' objects fail with the lastest builds (R: 2013-09-14 r63932, IRanges: 1.19.35). The cause seems to be that there is no 'extractROWS' method that can be found for the signature 'RangedData'. As an example, see:
>> ## generate the data
>> ranges <- IRanges(c(1,2,3),c(4,5,6))
>> rd = RangedData(ranges)
>> ## this fails
>> The last command returns: Error in (function (classes, fdef, mtable) : unable to find an inherited method for function ‘extractROWS’ for signature ‘"RangedData"’
>> Best wishes
>> Bioc-devel at r-project.org mailing list
> Bioc-devel at r-project.org mailing list
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109
Location: Arnold Building M1 B861
Phone: (206) 667-2793
More information about the Bioc-devel