[Bioc-devel] biocLite malfunctioning? and mzR package not working on R 3.0.0?

Dan Tenenbaum dtenenba at fhcrc.org
Wed Apr 3 16:33:30 CEST 2013


On Wed, Apr 3, 2013 at 7:15 AM, Andreas Heider
<aheider at trm.uni-leipzig.de> wrote:
> OK, but I am not able to install a single package right now. Can you
> confirm it works for you?
>

I assume you are on a Mac? You need a newer version of R 3.0.
Mac packages live in a different part of the CRAN-style repository
(bin/macosx/contrib) than they used to (bin/macosx/leopard/contrib).

CRAN has made the same change.

Dan



> Cheers,
> Andreas
>
>
> 2013/4/3 Steffen Neumann <sneumann at ipb-halle.de>
>
>> Hi,
>>
>> On Wed, 2013-04-03 at 13:15 +0200, Andreas Heider wrote:
>> ...
>> > Besides this I was not able to install the "mzR" package correctly on
>> both
>> > Mac OS X and Windows already some weeks ago. Was there some changes I am
>> > not aware about?
>>
>> On Windows where mzR comes as precompiled package,
>> which requires a matching Rcpp version.
>> Usually it helps to install both Rcpp and mzR at the same time.
>>
>> Yours,
>> Steffen
>>
>>
>> --
>> IPB Halle                    AG Massenspektrometrie & Bioinformatik
>> Dr. Steffen Neumann          http://www.IPB-Halle.DE
>> Weinberg 3                   http://msbi.bic-gh.de
>> 06120 Halle                  Tel. +49 (0) 345 5582 - 1470
>>                                   +49 (0) 345 5582 - 0
>> sneumann(at)IPB-Halle.DE     Fax. +49 (0) 345 5582 - 1409
>>
>>
>
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