[Bioc-devel] error in moscato1 BUILD

Dan Tenenbaum dtenenba at fhcrc.org
Thu Sep 13 22:46:31 CEST 2012


Hi Jianhong,

We should probably move this conversation back to the tracker since it
pertains to a submitted package. I will respond to you there.

Dan


On Thu, Sep 13, 2012 at 1:39 PM, Ou, Jianhong <Jianhong.Ou at umassmed.edu> wrote:
> Dear developers,
>
> I met problem in building my package on windows. It can be build and passed check on a Windows 7 (32bit), R 2.15.1, but can not be build on moscato1. Could anybody tell me the basic steps to debug this error?
>
> Here is the error
>
>
> * checking for file 'motifStack/DESCRIPTION' ... OK
> * preparing 'motifStack':
> * checking DESCRIPTION meta-information ... OK
> * installing the package to re-build vignettes
> * creating vignettes ... ERROR
> Loading required package: grImport
> Loading required package: grid
> Loading required package: XML
>
> Error: processing vignette 'motifStack.Rnw' failed with diagnostics:
>  chunk 1 (label = DNAseqLogo)
> Error : 1: invalid character in attribute value
> 2: attributes construct error
> 3: Couldn't find end of Start Tag picture line 3
> 4: Extra content at the end of the document
>
> Execution halted
>
> Yours sincerely,
>
> Jianhong Ou
>
> jianhong.ou at umassmed.edu<mailto:jianhong.ou at umassmed.edu>
>
>
>
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>
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