[Bioc-devel] Problems with imported ShortRead pkg

[Anita Lerch]

Great!
Both problem are solved.
Thanks a lot.

On Mon, 2012-11-19 at 07:08 -0800, Martin Morgan wrote:
> On 11/19/2012 02:15 AM, Anita Lerch wrote:
> > Hi,
> > even if I import IRanges, the error persist.
> 
> I've updated ShortRead (in devel, which requires using R-devel) to 1.17.5, 
> addressing the import problem. This is available via svn now or biocLite 
> tomorrow (Tuesday) after 10am Seattle time.
> 
> I think the 'show' problem has also been addressed, but would appreciate hearing 
> otherwise.
> 
> Martin
> 
> 
> > Anita
> >
> >
> > On Fri, 2012-11-16 at 13:42 +0000, Hahne, Florian wrote:
> >> Hi Anita,
> >> it seems that FilterRules is defined in the IRanges package. If you want
> >> to use it you will have to explicitly import it. Can't quite see how this
> >> is related to importing or not importing ShortRead. The only reason why
> >> this works when you require ShortRead is because it depends on IRanges and
> >> will automatically attach it. This does not happen when you just import
> >> from it.
> >> Florian
> >>
> >>
> >>
> >>
> >>
> >>
> >> On 11/16/12 12:40 PM, "Anita Lerch" <anita.lerch at fmi.ch> wrote:
> >>
> >>> FilterRules
> >>
> >
> 
> 

-- 
Anita Lerch
Friedrich Miescher Institute
Maulbeerstrasse 66
WRO-1066.P22
4058 Basel
Phone: +41 (0)61 697 5172
Email: anita.lerch at fmi.ch