[Bioc-devel] Packages available in the build system

[Nicolas Delhomme]

Hi Dan,

Good to know!

Thanks,

Nico

---------------------------------------------------------------
Nicolas Delhomme

Genome Biology Computational Support

European Molecular Biology Laboratory

Tel: +49 6221 387 8310
Email: nicolas.delhomme at embl.de
Meyerhofstrasse 1 - Postfach 10.2209
69102 Heidelberg, Germany
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On 31 Mar 2012, at 21:00, Dan Tenenbaum wrote:

> On Sat, Mar 31, 2012 at 9:46 AM, Nicolas Delhomme <delhomme at embl.de> wrote:
>> Hi,
>> 
>> I'm thinking about using the Rcompression library for a package I'm writing and it is only available from the http://www.omegahat.org/R repository. I was wondering if this repo was used by the Bioc build system.
> 
> No, it is not.
> You can see the repositories used by the build system if you do this:
> library(BiocInstaller)
> biocinstallRepos()
> 
> Dan
> 
> 
>> If not, I'd welcome pointers to libraries with similar capabilities, e.g. I'm retrieving compressed fasta files with Rcurl and would like to uncompress them in R.
>> 
>> Thanks!
>> 
>> Nico
>> 
>> ---------------------------------------------------------------
>> Nicolas Delhomme
>> 
>> Genome Biology Computational Support
>> 
>> European Molecular Biology Laboratory
>> 
>> Tel: +49 6221 387 8310
>> Email: nicolas.delhomme at embl.de
>> Meyerhofstrasse 1 - Postfach 10.2209
>> 69102 Heidelberg, Germany
>> 
>> _______________________________________________
>> Bioc-devel at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel