[Bioc-devel] DEG data analysis

Pascual Laura.Pascual at avignon.inra.fr
Fri Sep 9 10:06:35 CEST 2011


I have a set of DEG illumina data, coming from 12 different accessions 
with replicates of each samples. I have been taking a look at edgeR and 
DESeq to analyse the data, and extract differential expressed tags. 
However all analysis seem to be based in pair comparasions. Is there any 
packge to made comparesions between a greater number of groups? Do you 
know if anybody is planning to add this analysis in any existing package?



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