[Bioc-devel] Reproducing erros on build and check

Benilton Carvalho beniltoncarvalho at gmail.com
Tue Oct 18 10:22:05 CEST 2011

liverpool and moscato1 are running r57266 and r57224 respectively.
that may help you tracking down the problem. b

2011/10/18 Stefan McKinnon Høj-Edwards <Stefan.Hoj-Edwards at agrsci.dk>:
> Hi,
> I have just noticed that my package AnnotationFuncs does pass build and check for the next release on the Windows hosts. On the Linux and Max OS X hosts there are no problems.
> The error logs are these:
> - http://bioconductor.org/checkResults/devel/bioc-LATEST/AnnotationFuncs/liverpool-buildsrc.html
> - http://bioconductor.org/checkResults/devel/bioc-LATEST/AnnotationFuncs/moscato1-checksrc.html
> My personal workstation is also running Windows (7), and I have checked and built the package using the latest R release (R version 2.14.0 alpha (2011-10-04 r57169)), but I am not able to reproduce the errors displayed on the log at BioConductor.
> I have also been looking through my code, and I cannot trace the error giving problems in the build and check above:
> Error in function (x)  : no function to return from, jumping to top level
> Execution halted
> Error in function (x)  : attempt to apply non-function
> Execution halted
> Any suggestions?
> Kind regards,
> Stefan McKinnon Høj-Edwards              Dept. of Molecular Biology and Genetics
> Ph.D. Fellow                             Aarhus University
>                                         Blichers Allé 20, Postboks 50
>                                         DK-8830 Tjele
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