[Bioc-devel] Committing changes to the release branch

Robert Castelo robert.castelo at upf.edu
Mon May 3 22:19:03 CEST 2010


Patrick, i tried now with username and password and it works smoothly,
i must have been using the readonly user and password by default. sorry
for bothering about this issue again, and thanks for your help!

robert.

On 5/3/10 8:59 PM, Patrick Aboyoun wrote:
> Robert,
> I double-checked the svn authorization file and the BioC 2.6 qpgraph 
> properties are properly specified and you are granted read/write 
> permission. Could you perform the checkout using --username and 
> --password with your username and password to ensure you are using the 
> right account information? Other developers have been able to check 
> into the BioC 2.6 branch, so this doesn't appear to be a global issue 
> anymore.
>
>
> Patrick
>
>
> On 5/3/10 3:35 AM, Robert Castelo wrote:
>> hi Patrick,
>>
>> i was trying this morning also to update the main help page of my
>> package at the release branch and got this error:
>>
>>
>> svn: Commit failed (details follow):
>> svn: CHECKOUT of '/bioconductor/!
>> svn/ver/46404/branches/RELEASE_2_6/madman/Rpacks/qpgraph/DESCRIPTION':
>> 403 Forbidden  (https://hedgehog.fhcrc.org)
>>
>> the preceeding checkout command was:
>>
>> svn co
>> https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_6/madman/Rpacks/qpgraph 
>>
>>
>> after which i modified the main help page of the package, the
>> DESCRIPTION and the NEWS file and then i tried the checkin.
>>
>> i'm sorry if i missed anything from the previous discussion but i
>> understood that i should be able to checkin change in the release :-?
>>
>> cheers,
>> robert.
>>
>> On Thu, 2010-04-29 at 09:29 -0700, Patrick Aboyoun wrote:
>>> I was looking into this issue and found it was a typo that was
>>> propagated throughout the svn permissions file. Please try committing
>>> your changes to the BioC 2.6 branch again. Sorry for the inconvenience.
>>>
>>> Cheers,
>>> Patrick
>>>
>>>
>>> On 4/29/10 6:55 AM, Seth Falcon wrote:
>>>> Hi,
>>>>
>>>> First, we will investigate the svn permission issues this morning and
>>>> things going again.
>>>>
>>>> On 4/29/10 6:34 AM, Kasper Daniel Hansen wrote:
>>>>
>>>>> At this point I would like to highlight the final step on the Bioc
>>>>> HOWTO for updating the release branch:
>>>>>
>>>>> "Send a mail to the main bioconductor email list to announce the 
>>>>> new version."
>>>>>
>>>>> It seems almost no-one - including the Biocore team - follows this.
>>>>> Should this requirement be removed (I don't think so personally, but
>>>>> since it is not adhered to, there is not much point in having it)?
>>>>>
>>>> This doesn't strike me as a very fair assessment.  In many cases,
>>>> changes are initiated due to discussion on the list and these threads
>>>> are often resolved with a "fixed in release and devel available in
>>>> 36hrs" sort of message.
>>>>
>>>> In any case, sending an email to the Bioconductor list to announce
>>>> changes to release packages seems like a useful idea.  I would 
>>>> encourage
>>>> folks to follow it.
>>>>
>>>> + seth
>>>>
>>>> _______________________________________________
>>>> Bioc-devel at stat.math.ethz.ch mailing list
>>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>>>>
>>> _______________________________________________
>>> Bioc-devel at stat.math.ethz.ch mailing list
>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>>>
>



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