[Bioc-devel] SVN changes bloxsom are out of date

James W. MacDonald jmacdon at med.umich.edu
Fri Nov 6 14:58:55 CET 2009


Hi Henrik,

Henrik Bengtsson wrote:
> Hi,
> 
> could you then please fix the bug that causes problems for packages
> with periods in their name, e.g.

You will be hard pressed to fix this 'bug', as in the Blosxom world this 
is a feature. You tell Blosxom which 'flavour' to use by passing a URI 
with the form

http://www.theserver.org/cgi-bin/blosxom.cgi/myfavorite.flavour

where 'flavour' indicates what templates to use for the webpage.

Since this is a basic feature of Blosxom you will not be able to get the 
maintainer to make any changes, nor would it be simple to make the 
necessary changes to the code ourselves.

Best,

Jim


> 
> http://bioconductor.org/packages/2.5/bioc/html/aroma.light.html
> 
> Example:
> 
> http://fgc.lsi.umich.edu/cgi-bin/blosxom.cgi/aroma.light
> 
> gives
> 
> "Error: I'm afraid this is the first I've heard of a "light" flavoured
> Blosxom. Try dropping the "/+light" bit from the end of the URL."
> 
> Workaround:
> 
> http://fgc.lsi.umich.edu/cgi-bin/blosxom.cgi/aroma
> 
> but picks up more than one package.
> 
> Thanks
> 
> /Henrik
> 
> On Thu, Nov 5, 2009 at 9:07 PM, Patrick Aboyoun <paboyoun at fhcrc.org> wrote:
>> Steffen,
>> We are in the process of moving the blosxom changelog from U of M to the
>> Hutch and it is due to competing efforts in other areas that it hasn't been
>> completed yet. Now that the BioC 2.5 release is out we can spend some time
>> getting the changelog online.
>>
>>
>> Patrick
>>
>>
>> Steffen Neumann wrote:
>>> Hi,
>>>
>>> the last changes here are from October:
>>> http://fgc.lsi.umich.edu/cgi-bin/blosxom.cgi/
>>>
>>> Did I miss anything ?
>>>
>>> Yours,
>>> Steffen
>>>
>>>
>> _______________________________________________
>> Bioc-devel at stat.math.ethz.ch mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>>
> 
> _______________________________________________
> Bioc-devel at stat.math.ethz.ch mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel

-- 
James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 48109-5618
734-615-7826



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