[Bioc-devel] FYI: Windows build of affyPLM devel has been broken for a while

Henrik Bengtsson hb at stat.berkeley.edu
Wed Sep 19 23:10:08 CEST 2007


the affyPLM devel build for Windows has been broken for a while.  Last
successful build was/is v1.13.6 (2007-06-22) and now were on
v1.13.13(14).  Since there has recently been quite of bit of migration
from affyPLM to preprocessCore, code that relies on
affyPLM/preprocessCore is out of date on Windows.

I'm not sure this is a package maintainer problem or a problem with
the BioC builds. From the build report:

texi2dvi.exe: Permission denied: MAplots.tex
Error in texi2dvi(file = bft, pdf = TRUE, clean = FALSE, quiet = quiet) :
  running 'texi2dvi' on 'MAplots.tex' failed
Calls: buildVignettes -> texi2dvi
Execution halted
Error: /undefinedfilename in
Operand stack:

Execution stack:
   %interp_exit   .runexec2   --nostringval--   --nostringval--
--nostringval--   2   %stopped_push   --nostringval--
--nostringval--   --nostringval--   false   1   %stopped_push
Dictionary stack:
   --dict:1126/1686(ro)(G)--   --dict:0/20(G)--   --dict:70/200(L)--
Current allocation mode is local
Last OS error: No such file or directory
AFPL Ghostscript 8.54: Unrecoverable error, exit code 1



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