[Bioc-devel] Bioconductor tools for a website ...

[Florian Hahne]

In addition, there is a CRAN package CGIwithR and also a Rcgi package
(somewhere on the web...) which provide CGI interfaces to R/Bioconductor.
Cheers,
Florian

Seth Falcon schrieb:
> David McKillen <david at mckillen.net> writes:
>
>   
>> Dont' mean to be a bother but I can't seem to find a good source for
>> getting more information.  I am trying to determine whether or not I
>> can access bioconductor applications/tools via the command line for
>> the purpose of incorporating bioconductor into a website.  
>>     
>
> You can run R as a command line tool:
>
>    R --slave < somescript.R
>
> You can run in batch mode, which is a bit different: R CMD BATCH
> somescript.R
>
> There is a separate project called littler which behaves more like a
> typical unix tool than R does on its own.
>
> For building web GUIs you might want to look at:
>
>    Rpad
>    Rserve
>    
> For more robust webservices approach see this post:
>
>    https://stat.ethz.ch/pipermail/r-devel/2007-January/044176.html
>
> There is also a project called carmaweb:
>
>   http://nar.oxfordjournals.org/cgi/content/full/34/suppl_2/W498
>
> + seth
>
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>   


-- 
Florian Hahne
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