[Bioc-devel] affyQA/QC

Kasper Daniel Hansen khansen at stat.Berkeley.EDU
Sat Sep 23 01:33:12 CEST 2006

The attachment is lost, at least on my side.


On Sep 22, 2006, at 3:36 PM, Robert Gentleman wrote:

> Hi,
>   I am trying to put together a set of, what one might regard, as  
> standard plots and summary statistics that should be collected on  
> any set of Affymetrix microarrays (at least ones for gene  
> expression). The first pass is attached, I would appreciate any  
> comments on it, especially with regard to things that I have  
> missed, or things I have suggested that don't seem to be quite  
> correct, or could be improved.
>  On an implementation note - I will be making use of existing  
> software and intend to work with Craig Parman to put this into the  
> existing affyQCReport package - users of that might want to let me  
> know what functionality they are relying on, but this should be  
> strict additions.
>  thanks
>    Robert
> -- 
> Robert Gentleman, PhD
> Program in Computational Biology
> Division of Public Health Sciences
> Fred Hutchinson Cancer Research Center
> 1100 Fairview Ave. N, M2-B876
> PO Box 19024
> Seattle, Washington 98109-1024
> 206-667-7700
> rgentlem at fhcrc.org
> _______________________________________________
> Bioc-devel at stat.math.ethz.ch mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel

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