[Bioc-devel] affyQA/QC
Kasper Daniel Hansen
khansen at stat.Berkeley.EDU
Sat Sep 23 01:33:12 CEST 2006
The attachment is lost, at least on my side.
Kasper
On Sep 22, 2006, at 3:36 PM, Robert Gentleman wrote:
> Hi,
> I am trying to put together a set of, what one might regard, as
> standard plots and summary statistics that should be collected on
> any set of Affymetrix microarrays (at least ones for gene
> expression). The first pass is attached, I would appreciate any
> comments on it, especially with regard to things that I have
> missed, or things I have suggested that don't seem to be quite
> correct, or could be improved.
>
> On an implementation note - I will be making use of existing
> software and intend to work with Craig Parman to put this into the
> existing affyQCReport package - users of that might want to let me
> know what functionality they are relying on, but this should be
> strict additions.
>
>
> thanks
> Robert
>
> --
> Robert Gentleman, PhD
> Program in Computational Biology
> Division of Public Health Sciences
> Fred Hutchinson Cancer Research Center
> 1100 Fairview Ave. N, M2-B876
> PO Box 19024
> Seattle, Washington 98109-1024
> 206-667-7700
> rgentlem at fhcrc.org
> _______________________________________________
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