[Bioc-devel] biocLite() ready for BioC devel downloads (R 2.4 required)

Wolfgang Huber huber at ebi.ac.uk
Thu May 4 12:14:12 CEST 2006


Hi Herve,

can you please also check it in to /madman/installScripts (or to some
other documented place). I like to have the line

source("/home/huber/madman/installScripts/biocLite.R")

in my .Rprofile to avoid typing the tedious URL all the time.

  Cheers
  Wolfgang

Herve Pages wrote:
> Hi,
> 
> biocLite() can now be used to download and install Bioconductor
> developmental packages again.
> 
> Reminder:
> 
>   - "Bioconductor devel" is now Bioconductor 1.9.
> 
>   - The build/check results for "Bioconductor devel" are here:
>       http://bioconductor.org/checkResults/1.9/
> 
>   - biocLite() knows which is the "right" version of Bioconductor
>     for you. This depends on the version of R that you are using:
>       R 2.2.z -> BioC 1.7
>       R 2.3.z -> BioC 1.8
>       R 2.4.z -> BioC 1.9
> 
>   - Doing this from R 2.4.0:
>       > source("http://bioconductor.org/biocLite.R")
>       > biocLite("Biobase")
>     will install last Biobase devel (1.11.3).
> 
> Cheers,
> 
> H.
> 


-- 
Best regards
   Wolfgang

-------------------------------------
Wolfgang Huber
European Bioinformatics Institute
European Molecular Biology Laboratory
Cambridge CB10 1SD
England
Phone: +44 1223 494642
Fax:   +44 1223 494486
Http:  www.ebi.ac.uk/huber



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