[Bioc-devel] NAMESPACE issue with recent R-devel

Seth Falcon sfalcon at fhcrc.org
Tue Aug 22 00:22:38 CEST 2006


Hi all,

A recent change to R-devel is causing the following WARNING message to
appear in the check results of a few packages:


    A namespace must be able to be loaded with just the base namespace
    loaded: otherwise if the namespace gets loaded by a saved object,
    the session will be unable to start.
    
    Probably some imports need to be declared in the NAMESPACE file.

In most cases, this can be solved by adding an import to the NAMESPACE
file.  There should be some additional package-specific messages about
what function wasn't found and this will tell you which package needs
importing.

The following packages seem to have this warning message:

    BioMVCClass
    DynDoc
    gaggle
    GEOquery
    graph
    hexbin
    hypergraph
    idiogram
    iSPlot
    KEGGSOAP
    MVCClass
    RdbiPgSQL
    reb
    rflowcyt
    Rgraphviz
    Rredland
    Ruuid
    tilingArray

If you are investigating, look at the check results for build node
"wellington" as it has a more recent R-devel than other nodes.

+ seth



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