[Bioc-devel] annotation package for Affymetrix Hum6000 array

Ting-Yuan Liu tliu at fhcrc.org
Tue Apr 25 19:08:13 CEST 2006


I am improving the experimental data set colonCA, which contains the data 
from  Alon et al. (1999, PubMed: 10359783).  I am trying to figure out 
what should be put in the "annotation" slot of the exprSet object for such 
data.  According to Alon 1999, they were using Affymetrix Hum6000 array, 
but I cannot find it in either Affymetrix website or BioConductor 
website.  Does anyone have ideas about what it is and what we should put 
in the annotation slot?  

Ting-Yuan Liu
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
Seattle, WA, USA

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