[Bioc-devel] New features in genArise

gcorral@ifc.unam.mx gcorral at ifc.unam.mx
Thu Dec 8 23:17:32 CET 2005

The genArise package implement as a new feature in the GUI a swap analysis where
a swap dye data file pair is the input. First, a flip dye consistency checking
is performed using a 2 SD cut and removing spots with expression level
inconsistency between this pair of swap dye replicates. Then a merged file is
obtained where the merged intensities will be the geometric means of the swap
dye replicates. After this you can perform the analysis as a single experiment.

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