xrnet: Hierarchical Regularized Regression

Fits hierarchical regularized regression models to incorporate potentially informative external data, Weaver and Lewinger (2019) <doi:10.21105/joss.01761>. Utilizes coordinate descent to efficiently fit regularized regression models both with and without external information with the most common penalties used in practice (i.e. ridge, lasso, elastic net). Support for standard R matrices, sparse matrices and big.matrix objects.

Version: 1.0.0
Depends: R (≥ 4.0)
Imports: Rcpp (≥ 0.12.19), foreach, bigmemory, methods
LinkingTo: Rcpp, RcppEigen, BH, bigmemory
Suggests: knitr, rmarkdown, testthat, Matrix, doParallel
Published: 2024-07-16
DOI: 10.32614/CRAN.package.xrnet
Author: Garrett Weaver ORCID iD [aut, cre], Dixin Shen [aut], Juan Pablo Lewinger [ctb, ths]
Maintainer: Garrett Weaver <gmweaver.usc at gmail.com>
BugReports: https://github.com/USCbiostats/xrnet/issues
License: GPL-2
URL: https://github.com/USCbiostats/xrnet, https://uscbiostats.github.io/xrnet/
NeedsCompilation: yes
Materials: README NEWS
CRAN checks: xrnet results


Reference manual: xrnet.pdf


Package source: xrnet_1.0.0.tar.gz
Windows binaries: r-devel: xrnet_1.0.0.zip, r-release: xrnet_1.0.0.zip, r-oldrel: xrnet_1.0.0.zip
macOS binaries: r-release (arm64): xrnet_1.0.0.tgz, r-oldrel (arm64): xrnet_1.0.0.tgz, r-release (x86_64): xrnet_1.0.0.tgz, r-oldrel (x86_64): xrnet_1.0.0.tgz
Old sources: xrnet archive

Reverse dependencies:

Reverse enhances: transreg


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