CRAN Package Check Results for Maintainer ‘Marti Catala <marti.catalasabate at ndorms.ox.ac.uk>’

Last updated on 2024-10-31 10:50:28 CET.

Package ERROR OK
CohortCharacteristics 13
DrugUtilisation 13
omopgenerics 13
OmopViewer 2 11
PatientProfiles 13

Package CohortCharacteristics

Current CRAN status: OK: 13

Package DrugUtilisation

Current CRAN status: OK: 13

Package omopgenerics

Current CRAN status: OK: 13

Package OmopViewer

Current CRAN status: ERROR: 2, OK: 11

Additional issues

noSuggests

Version: 0.1.0
Check: tests
Result: ERROR Running 'testthat.R' [178s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(OmopViewer) > > test_check("OmopViewer") Starting 2 test processes [ FAIL 1 | WARN 0 | SKIP 11 | PASS 89 ] ══ Skipped tests (11) ══════════════════════════════════════════════════════════ • On CRAN (9): 'test-background.R:18:3', 'test-background.R:31:3', 'test-appStatic.R:29:3', 'test-appStatic.R:36:3', 'test-appStatic.R:52:3', 'test-appStatic.R:97:3', 'test-summary.R:9:3', 'test-packagesSupported.R:214:3', 'test-packagesSupported.R:257:3' • Sys.getenv("CDM5_POSTGRESQL_DBNAME") == "" is TRUE (1): 'test-packagesSupported.R:274:3' • Sys.getenv("EUNOMIA_DATA_FOLDER") == "" is TRUE (1): 'test-packagesSupported.R:65:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-packagesSupported.R:17:3'): IncidencePrevalence shiny ────────── <dplyr:::mutate_error/rlang_error/error/condition> Error in `dplyr::mutate(., person_years = round(.data$person_days/365.25, 3))`: i In argument: `person_years = round(.data$person_days/365.25, 3)`. Caused by error in `.data$person_days`: ! Column `person_days` not found in `.data`. [ FAIL 1 | WARN 0 | SKIP 11 | PASS 89 ] Error: Test failures Execution halted Flavor: r-devel-windows-x86_64

Version: 0.1.0
Check: tests
Result: ERROR Running 'testthat.R' [170s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(OmopViewer) > > test_check("OmopViewer") Starting 2 test processes [ FAIL 1 | WARN 0 | SKIP 11 | PASS 89 ] ══ Skipped tests (11) ══════════════════════════════════════════════════════════ • On CRAN (9): 'test-background.R:18:3', 'test-background.R:31:3', 'test-appStatic.R:29:3', 'test-appStatic.R:36:3', 'test-appStatic.R:52:3', 'test-appStatic.R:97:3', 'test-summary.R:9:3', 'test-packagesSupported.R:214:3', 'test-packagesSupported.R:257:3' • Sys.getenv("CDM5_POSTGRESQL_DBNAME") == "" is TRUE (1): 'test-packagesSupported.R:274:3' • Sys.getenv("EUNOMIA_DATA_FOLDER") == "" is TRUE (1): 'test-packagesSupported.R:65:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-packagesSupported.R:17:3'): IncidencePrevalence shiny ────────── <dplyr:::mutate_error/rlang_error/error/condition> Error in `dplyr::mutate(., person_years = round(.data$person_days/365.25, 3))`: i In argument: `person_years = round(.data$person_days/365.25, 3)`. Caused by error in `.data$person_days`: ! Column `person_days` not found in `.data`. [ FAIL 1 | WARN 0 | SKIP 11 | PASS 89 ] Error: Test failures Execution halted Flavor: r-release-windows-x86_64

Package PatientProfiles

Current CRAN status: OK: 13