Last updated on 2024-07-24 12:21:27 CEST.
| Package | NOTE | OK |
|---|---|---|
| apex | 2 | 11 |
| kknn | 4 | 9 |
| phangorn | 13 |
Current CRAN status: NOTE: 2, OK: 11
Version: 1.0.6
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
multidna2alignment.Rd: as.alignment
multidna2genind.Rd: genind-class, DNAbin2genind
multidna2multiphyDat.Rd: DNAbin2genind
plot-multidna-method.Rd: image.DNAbin
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Current CRAN status: NOTE: 4, OK: 9
Version: 1.3.1
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
specClust.Rd: arpack
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 1.3.1
Check: compiled code
Result: NOTE
File ‘kknn/libs/kknn.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: NOTE: 13
Version: 2.11.1
Check: C++ specification
Result: NOTE
Specified C++11: please drop specification unless essential
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 2.11.1
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
add.tips.Rd: bind.tree
addConfidences.Rd: plot.phylo
add_ci.Rd: plot.phylo
add_edge_length.Rd: node.depth.edgelength, consensus
as.phyDat.Rd: read.dna, read.nexus.data
as.splits.Rd: prop.part
baseFreq.Rd: base.freq
bootstrap.pml.Rd: plot.phylo, nodelabels
cladePar.Rd: plot.phylo
coalSpeciesTree.Rd: speciesTree
densiTree.Rd: plot.phylo
dna2codon.Rd: trans
image.phyDat.Rd: image.DNAbin, image.AAbin
maxCladeCred.Rd: consensus, prop.part
phyDat.Rd: DNAbin, as.DNAbin, read.dna, read.nexus.data
plotBS.Rd: plot.phylo, nodelabels, consensus
pml.Rd: plot.phylo
pml_bb.Rd: rtt
read.nexus.splits.Rd: prop.part
upgma.Rd: as.phylo, fastme
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 2.11.1
Check: installed package size
Result: NOTE
installed size is 5.1Mb
sub-directories of 1Mb or more:
doc 1.5Mb
libs 1.2Mb
Flavors: r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 2.11.1
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘seqLogo’
Flavor: r-oldrel-macos-arm64
Version: 2.11.1
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'Biostrings', 'seqLogo'
Flavor: r-oldrel-macos-x86_64