CRAN Package Check Results for Maintainer ‘Jenna Reps <jreps at its.jnj.com>’

Last updated on 2025-04-19 06:49:55 CEST.

Package ERROR NOTE OK
Characterization 2 11
OhdsiReportGenerator 4 2 7
OhdsiShinyAppBuilder 2 11

Package Characterization

Current CRAN status: NOTE: 2, OK: 11

Version: 2.1.3
Check: dependencies in R code
Result: NOTE OpenJDK 64-Bit Server VM warning: The Windows job object has enabled multiple processor groups (2) but the UseAllWindowsProcessorGroups flag is off. Some processors might not be used. Flavors: r-devel-windows-x86_64, r-release-windows-x86_64

Package OhdsiReportGenerator

Current CRAN status: ERROR: 4, NOTE: 2, OK: 7

Version: 1.0.1
Check: dependencies in R code
Result: NOTE OpenJDK 64-Bit Server VM warning: The Windows job object has enabled multiple processor groups (2) but the UseAllWindowsProcessorGroups flag is off. Some processors might not be used. Flavors: r-devel-windows-x86_64, r-release-windows-x86_64

Version: 1.0.1
Check: tests
Result: ERROR Running ‘testthat.R’ [4s/3s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("OhdsiReportGenerator") Loading required package: OhdsiReportGenerator Connecting using SQLite driver [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • empty test (1): 'test-Helpers.R:89:1' • skip prediction report due to odd linux error (1): 'test-PredictionReport.R:5:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Generate.R:10:3'): generatePresentationMultiple ──────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generatePresentationMultiple(...) at test-Generate.R:10:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] Error: Test failures Execution halted Closing database connection Flavor: r-release-macos-arm64

Version: 1.0.1
Check: tests
Result: ERROR Running ‘testthat.R’ [9s/7s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("OhdsiReportGenerator") Loading required package: OhdsiReportGenerator Connecting using SQLite driver [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • empty test (1): 'test-Helpers.R:89:1' • skip prediction report due to odd linux error (1): 'test-PredictionReport.R:5:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Generate.R:10:3'): generatePresentationMultiple ──────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generatePresentationMultiple(...) at test-Generate.R:10:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] Error: Test failures Execution halted Closing database connection Flavor: r-release-macos-x86_64

Version: 1.0.1
Check: tests
Result: ERROR Running ‘testthat.R’ [6s/5s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("OhdsiReportGenerator") Loading required package: OhdsiReportGenerator Connecting using SQLite driver [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • empty test (1): 'test-Helpers.R:89:1' • skip prediction report due to odd linux error (1): 'test-PredictionReport.R:5:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Generate.R:10:3'): generatePresentationMultiple ──────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generatePresentationMultiple(...) at test-Generate.R:10:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] Error: Test failures Execution halted Closing database connection Flavor: r-oldrel-macos-arm64

Version: 1.0.1
Check: tests
Result: ERROR Running ‘testthat.R’ [8s/7s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("OhdsiReportGenerator") Loading required package: OhdsiReportGenerator Connecting using SQLite driver [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • empty test (1): 'test-Helpers.R:89:1' • skip prediction report due to odd linux error (1): 'test-PredictionReport.R:5:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Generate.R:10:3'): generatePresentationMultiple ──────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generatePresentationMultiple(...) at test-Generate.R:10:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] Error: Test failures Execution halted Closing database connection Flavor: r-oldrel-macos-x86_64

Package OhdsiShinyAppBuilder

Current CRAN status: NOTE: 2, OK: 11

Version: 1.0.0
Check: dependencies in R code
Result: NOTE OpenJDK 64-Bit Server VM warning: The Windows job object has enabled multiple processor groups (2) but the UseAllWindowsProcessorGroups flag is off. Some processors might not be used. Flavors: r-devel-windows-x86_64, r-release-windows-x86_64