Last updated on 2025-05-12 12:49:41 CEST.
| Package | ERROR | OK |
|---|---|---|
| Characterization | 13 | |
| OhdsiReportGenerator | 4 | 9 |
| OhdsiShinyAppBuilder | 13 |
Current CRAN status: OK: 13
Current CRAN status: ERROR: 4, OK: 9
Version: 1.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [5s/4s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> test_check("OhdsiReportGenerator")
Loading required package: OhdsiReportGenerator
Connecting using SQLite driver
[ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• empty test (1): 'test-Helpers.R:89:1'
• skip prediction report due to odd linux error (1):
'test-PredictionReport.R:5:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-Backwards.R:11:3'): generatePresentationMultiple old works ─────
Error in `find_quarto()`: Quarto command-line tools path not found!
Please make sure you have installed and added Quarto to your PATH or set the
QUARTO_PATH environment variable.
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test-Backwards.R:11:3
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─OhdsiReportGenerator::generatePresentationMultiple(...)
7. └─OhdsiReportGenerator::generatePresentation(...)
8. └─quarto::quarto_render(...)
9. └─quarto:::find_quarto()
10. └─cli::cli_abort(quarto_not_found_msg)
11. └─rlang::abort(...)
── Error ('test-Generate.R:10:3'): generatePresentation ────────────────────────
Error in `find_quarto()`: Quarto command-line tools path not found!
Please make sure you have installed and added Quarto to your PATH or set the
QUARTO_PATH environment variable.
Backtrace:
▆
1. └─OhdsiReportGenerator::generatePresentation(...) at test-Generate.R:10:3
2. └─quarto::quarto_render(...)
3. └─quarto:::find_quarto()
4. └─cli::cli_abort(quarto_not_found_msg)
5. └─rlang::abort(...)
── Error ('test-Generate.R:61:3'): generateFullReport ──────────────────────────
Error in `find_quarto()`: Quarto command-line tools path not found!
Please make sure you have installed and added Quarto to your PATH or set the
QUARTO_PATH environment variable.
Backtrace:
▆
1. └─OhdsiReportGenerator::generateFullReport(...) at test-Generate.R:61:3
2. └─quarto::quarto_render(...)
3. └─quarto:::find_quarto()
4. └─cli::cli_abort(quarto_not_found_msg)
5. └─rlang::abort(...)
[ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ]
Error: Test failures
Execution halted
Closing database connection
Flavor: r-release-macos-arm64
Version: 1.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [9s/7s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> test_check("OhdsiReportGenerator")
Loading required package: OhdsiReportGenerator
Connecting using SQLite driver
[ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• empty test (1): 'test-Helpers.R:89:1'
• skip prediction report due to odd linux error (1):
'test-PredictionReport.R:5:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-Backwards.R:11:3'): generatePresentationMultiple old works ─────
Error in `find_quarto()`: Quarto command-line tools path not found!
Please make sure you have installed and added Quarto to your PATH or set the
QUARTO_PATH environment variable.
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test-Backwards.R:11:3
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─OhdsiReportGenerator::generatePresentationMultiple(...)
7. └─OhdsiReportGenerator::generatePresentation(...)
8. └─quarto::quarto_render(...)
9. └─quarto:::find_quarto()
10. └─cli::cli_abort(quarto_not_found_msg)
11. └─rlang::abort(...)
── Error ('test-Generate.R:10:3'): generatePresentation ────────────────────────
Error in `find_quarto()`: Quarto command-line tools path not found!
Please make sure you have installed and added Quarto to your PATH or set the
QUARTO_PATH environment variable.
Backtrace:
▆
1. └─OhdsiReportGenerator::generatePresentation(...) at test-Generate.R:10:3
2. └─quarto::quarto_render(...)
3. └─quarto:::find_quarto()
4. └─cli::cli_abort(quarto_not_found_msg)
5. └─rlang::abort(...)
── Error ('test-Generate.R:61:3'): generateFullReport ──────────────────────────
Error in `find_quarto()`: Quarto command-line tools path not found!
Please make sure you have installed and added Quarto to your PATH or set the
QUARTO_PATH environment variable.
Backtrace:
▆
1. └─OhdsiReportGenerator::generateFullReport(...) at test-Generate.R:61:3
2. └─quarto::quarto_render(...)
3. └─quarto:::find_quarto()
4. └─cli::cli_abort(quarto_not_found_msg)
5. └─rlang::abort(...)
[ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ]
Error: Test failures
Execution halted
Closing database connection
Flavor: r-release-macos-x86_64
Version: 1.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [7s/6s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> test_check("OhdsiReportGenerator")
Loading required package: OhdsiReportGenerator
Connecting using SQLite driver
[ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• empty test (1): 'test-Helpers.R:89:1'
• skip prediction report due to odd linux error (1):
'test-PredictionReport.R:5:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-Backwards.R:11:3'): generatePresentationMultiple old works ─────
Error in `find_quarto()`: Quarto command-line tools path not found!
Please make sure you have installed and added Quarto to your PATH or set the
QUARTO_PATH environment variable.
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test-Backwards.R:11:3
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─OhdsiReportGenerator::generatePresentationMultiple(...)
7. └─OhdsiReportGenerator::generatePresentation(...)
8. └─quarto::quarto_render(...)
9. └─quarto:::find_quarto()
10. └─cli::cli_abort(quarto_not_found_msg)
11. └─rlang::abort(...)
── Error ('test-Generate.R:10:3'): generatePresentation ────────────────────────
Error in `find_quarto()`: Quarto command-line tools path not found!
Please make sure you have installed and added Quarto to your PATH or set the
QUARTO_PATH environment variable.
Backtrace:
▆
1. └─OhdsiReportGenerator::generatePresentation(...) at test-Generate.R:10:3
2. └─quarto::quarto_render(...)
3. └─quarto:::find_quarto()
4. └─cli::cli_abort(quarto_not_found_msg)
5. └─rlang::abort(...)
── Error ('test-Generate.R:61:3'): generateFullReport ──────────────────────────
Error in `find_quarto()`: Quarto command-line tools path not found!
Please make sure you have installed and added Quarto to your PATH or set the
QUARTO_PATH environment variable.
Backtrace:
▆
1. └─OhdsiReportGenerator::generateFullReport(...) at test-Generate.R:61:3
2. └─quarto::quarto_render(...)
3. └─quarto:::find_quarto()
4. └─cli::cli_abort(quarto_not_found_msg)
5. └─rlang::abort(...)
[ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ]
Error: Test failures
Execution halted
Closing database connection
Flavor: r-oldrel-macos-arm64
Version: 1.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [10s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> test_check("OhdsiReportGenerator")
Loading required package: OhdsiReportGenerator
Connecting using SQLite driver
[ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• empty test (1): 'test-Helpers.R:89:1'
• skip prediction report due to odd linux error (1):
'test-PredictionReport.R:5:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-Backwards.R:11:3'): generatePresentationMultiple old works ─────
Error in `find_quarto()`: Quarto command-line tools path not found!
Please make sure you have installed and added Quarto to your PATH or set the
QUARTO_PATH environment variable.
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test-Backwards.R:11:3
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─OhdsiReportGenerator::generatePresentationMultiple(...)
7. └─OhdsiReportGenerator::generatePresentation(...)
8. └─quarto::quarto_render(...)
9. └─quarto:::find_quarto()
10. └─cli::cli_abort(quarto_not_found_msg)
11. └─rlang::abort(...)
── Error ('test-Generate.R:10:3'): generatePresentation ────────────────────────
Error in `find_quarto()`: Quarto command-line tools path not found!
Please make sure you have installed and added Quarto to your PATH or set the
QUARTO_PATH environment variable.
Backtrace:
▆
1. └─OhdsiReportGenerator::generatePresentation(...) at test-Generate.R:10:3
2. └─quarto::quarto_render(...)
3. └─quarto:::find_quarto()
4. └─cli::cli_abort(quarto_not_found_msg)
5. └─rlang::abort(...)
── Error ('test-Generate.R:61:3'): generateFullReport ──────────────────────────
Error in `find_quarto()`: Quarto command-line tools path not found!
Please make sure you have installed and added Quarto to your PATH or set the
QUARTO_PATH environment variable.
Backtrace:
▆
1. └─OhdsiReportGenerator::generateFullReport(...) at test-Generate.R:61:3
2. └─quarto::quarto_render(...)
3. └─quarto:::find_quarto()
4. └─cli::cli_abort(quarto_not_found_msg)
5. └─rlang::abort(...)
[ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ]
Error: Test failures
Execution halted
Closing database connection
Flavor: r-oldrel-macos-x86_64
Current CRAN status: OK: 13