CRAN Package Check Results for Package OhdsiReportGenerator

Last updated on 2025-04-17 21:51:52 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.1 6.29 96.65 102.94 OK
r-devel-linux-x86_64-debian-gcc 1.0.1 3.95 68.47 72.42 OK
r-devel-linux-x86_64-fedora-clang 1.0.1 159.69 OK
r-devel-linux-x86_64-fedora-gcc 1.0.1 171.70 OK
r-devel-windows-x86_64 1.0.1 8.00 123.00 131.00 NOTE
r-patched-linux-x86_64 1.0.1 6.83 92.90 99.73 OK
r-release-linux-x86_64 1.0.1 5.38 92.36 97.74 OK
r-release-macos-arm64 1.0.1 32.00 ERROR
r-release-macos-x86_64 1.0.1 57.00 ERROR
r-release-windows-x86_64 1.0.1 9.00 127.00 136.00 NOTE
r-oldrel-macos-arm64 1.0.1 46.00 ERROR
r-oldrel-macos-x86_64 1.0.1 63.00 ERROR
r-oldrel-windows-x86_64 1.0.1 10.00 147.00 157.00 OK

Check Details

Version: 1.0.1
Check: dependencies in R code
Result: NOTE OpenJDK 64-Bit Server VM warning: The Windows job object has enabled multiple processor groups (2) but the UseAllWindowsProcessorGroups flag is off. Some processors might not be used. Flavors: r-devel-windows-x86_64, r-release-windows-x86_64

Version: 1.0.1
Check: tests
Result: ERROR Running ‘testthat.R’ [4s/3s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("OhdsiReportGenerator") Loading required package: OhdsiReportGenerator Connecting using SQLite driver [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • empty test (1): 'test-Helpers.R:89:1' • skip prediction report due to odd linux error (1): 'test-PredictionReport.R:5:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Generate.R:10:3'): generatePresentationMultiple ──────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generatePresentationMultiple(...) at test-Generate.R:10:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] Error: Test failures Execution halted Closing database connection Flavor: r-release-macos-arm64

Version: 1.0.1
Check: tests
Result: ERROR Running ‘testthat.R’ [8s/6s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("OhdsiReportGenerator") Loading required package: OhdsiReportGenerator Connecting using SQLite driver [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • empty test (1): 'test-Helpers.R:89:1' • skip prediction report due to odd linux error (1): 'test-PredictionReport.R:5:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Generate.R:10:3'): generatePresentationMultiple ──────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generatePresentationMultiple(...) at test-Generate.R:10:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] Error: Test failures Execution halted Closing database connection Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 1.0.1
Check: tests
Result: ERROR Running ‘testthat.R’ [5s/4s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("OhdsiReportGenerator") Loading required package: OhdsiReportGenerator Connecting using SQLite driver [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • empty test (1): 'test-Helpers.R:89:1' • skip prediction report due to odd linux error (1): 'test-PredictionReport.R:5:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Generate.R:10:3'): generatePresentationMultiple ──────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generatePresentationMultiple(...) at test-Generate.R:10:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] Error: Test failures Execution halted Closing database connection Flavor: r-oldrel-macos-arm64