Last updated on 2025-04-19 06:49:53 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| aplot | 13 | ||
| aplotExtra | 13 | ||
| badger | 13 | ||
| dlstats | 13 | ||
| emojifont | 3 | 10 | |
| fanyi | 13 | ||
| ggbreak | 13 | ||
| ggfun | 10 | 3 | |
| ggimage | 10 | 3 | |
| ggplotify | 13 | ||
| ggtangle | 10 | 3 | |
| gson | 13 | ||
| hexSticker | 3 | 10 | |
| meme | 13 | ||
| mirrorselect | 13 | ||
| plotbb | 13 | ||
| rvcheck | 13 | ||
| scatterpie | 13 | ||
| scholar | 1 | 12 | |
| seqmagick | 10 | 3 | |
| shadowtext | 13 | ||
| shinyTempSignal | 10 | 3 | |
| TDbook | 13 | ||
| tidydr | 13 | ||
| tidytree | 13 | ||
| wget | 13 | ||
| wikiprofiler | 1 | 12 | |
| yulab.utils | 13 |
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: NOTE: 3, OK: 10
Version: 0.5.5
Check: installed package size
Result: NOTE
installed size is 7.0Mb
sub-directories of 1Mb or more:
emoji_fonts 6.4Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: NOTE: 10, OK: 3
Version: 0.1.8
Check: DESCRIPTION meta-information
Result: NOTE
Missing dependency on R >= 4.2.0 because package code uses the pipe
placeholder syntax added in R 4.2.0.
File(s) using such syntax:
‘utilities.R’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Current CRAN status: NOTE: 10, OK: 3
Version: 0.3.3
Check: DESCRIPTION meta-information
Result: NOTE
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘geom_phylopic.R’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: NOTE: 10, OK: 3
Version: 0.0.6
Check: DESCRIPTION meta-information
Result: NOTE
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘cnet.r’ ‘graph.r’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: NOTE: 3, OK: 10
Version: 0.4.9
Check: LazyData
Result: NOTE
'LazyData' is specified without a 'data' directory
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: ERROR: 1, NOTE: 12
Version: 0.2.4
Check: Rd files
Result: NOTE
checkRd: (-1) get_profile.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) get_profile.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) get_profile.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) get_profile.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) get_profile.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.2.4
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
get_scholar_resp.Rd: response, GET
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64
Version: 0.2.4
Check: examples
Result: ERROR
Running examples in 'scholar-Ex.R' failed
The error most likely occurred in:
> ### Name: author_position
> ### Title: Get author order.
> ### Aliases: author_position
>
> ### ** Examples
>
> library(scholar)
>
> id <- "bg0BZ-QAAAAJ&hl"
>
> authorlist <- scholar::get_publications(id)$author
Error in curl::curl_fetch_memory(url, handle = handle) :
Timeout was reached [scholar.google.com]: SSL/TLS connection timeout
Calls: <Anonymous> ... request_fetch.write_memory -> <Anonymous> -> raise_libcurl_error
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'scholar.Rmd' using rmarkdown
Quitting from scholar.Rmd:34-48 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `curl::curl_fetch_memory()`:
! Timeout was reached [scholar.google.com]: SSL/TLS connection timeout
---
Backtrace:
▆
1. ├─scholar::get_profile(id)
2. │ └─scholar::get_scholar_resp(url)
3. │ ├─httr::GET(url, handle = scholar_handle())
4. │ │ └─httr:::handle_url(handle, url, ...)
5. │ └─scholar:::scholar_handle()
6. │ └─httr::GET(sample_url)
7. │ └─httr:::request_perform(req, hu$handle$handle)
8. │ ├─httr:::request_fetch(req$output, req$url, handle)
9. │ └─httr:::request_fetch.write_memory(req$output, req$url, handle)
10. │ └─curl::curl_fetch_memory(url, handle = handle)
11. └─curl:::raise_libcurl_error(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'scholar.Rmd' failed with diagnostics:
Timeout was reached [scholar.google.com]: SSL/TLS connection timeout
--- failed re-building 'scholar.Rmd'
SUMMARY: processing the following file failed:
'scholar.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-windows-x86_64
Current CRAN status: NOTE: 10, OK: 3
Version: 0.1.7
Check: DESCRIPTION meta-information
Result: NOTE
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘consensus.R’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: NOTE: 10, OK: 3
Version: 0.0.8
Check: DESCRIPTION meta-information
Result: NOTE
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘app_server.R’ ‘function.R’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: ERROR: 1, OK: 12
Version: 0.1.5
Check: examples
Result: ERROR
Running examples in ‘wikiprofiler-Ex.R’ failed
The error most likely occurred in:
> ### Name: wpplot
> ### Title: Input specific wikipathways ID to get an output in class of
> ### wpplot.
> ### Aliases: wpplot
>
> ### ** Examples
>
> if (yulab.utils::has_internet())
+ wpplot('WP179')
Warning in (function (con = stdin(), n = -1L, ok = TRUE, warn = TRUE, encoding = "unknown", :
incomplete final line found on 'https://www.wikipathways.org/wikipathways-assets/pathways/WP179/WP179.svg'
Error in rsvg::rsvg_nativeraster(f) :
Failed to parse svg: XML parse error: Error domain 1 code 73 on line 1 column 294913 of data: Couldn't find end of Start Tag g line 1
Calls: <Anonymous> ... annotation_custom -> layer -> as.grob -> as.grob.wpplot -> <Anonymous>
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Current CRAN status: OK: 13