Last updated on 2025-06-06 21:53:03 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| cornet | 13 | ||
| joinet | 3 | 10 | |
| palasso | 3 | 10 | |
| starnet | 8 | 5 | |
| transreg | 8 | 2 | 3 |
Current CRAN status: OK: 13
Current CRAN status: NOTE: 3, OK: 10
Version: 1.0.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘remMap’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: NOTE: 3, OK: 10
Version: 1.0.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘CorShrink’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: ERROR: 8, OK: 5
Version: 0.0.7
Check: tests
Result: ERROR
Running ‘testthat.R’ [19s/22s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 32 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test.R:183:7'): same loss ─────────────────────────────────────────
abs(a - b) < 0.001 is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 32 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.0.7
Check: tests
Result: ERROR
Running ‘testthat.R’ [11s/16s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 32 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test.R:183:7'): same loss ─────────────────────────────────────────
abs(a - b) < 0.001 is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 32 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.0.7
Check: tests
Result: ERROR
Running ‘testthat.R’ [27s/83s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 32 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test.R:183:7'): same loss ─────────────────────────────────────────
abs(a - b) < 0.001 is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 32 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.0.7
Check: tests
Result: ERROR
Running ‘testthat.R’ [36s/63s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 34 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test.R:183:7'): same loss ─────────────────────────────────────────
abs(a - b) < 0.001 is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 34 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.0.7
Check: tests
Result: ERROR
Running 'testthat.R' [15s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 32 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test.R:183:7'): same loss ─────────────────────────────────────────
abs(a - b) < 0.001 is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 32 ]
Error: Test failures
Execution halted
Flavor: r-devel-windows-x86_64
Version: 0.0.7
Check: tests
Result: ERROR
Running ‘testthat.R’ [17s/20s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 32 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test.R:183:7'): same loss ─────────────────────────────────────────
abs(a - b) < 0.001 is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 32 ]
Error: Test failures
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.0.7
Check: tests
Result: ERROR
Running 'testthat.R' [14s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 32 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test.R:183:7'): same loss ─────────────────────────────────────────
abs(a - b) < 0.001 is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 32 ]
Error: Test failures
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.0.7
Check: tests
Result: ERROR
Running 'testthat.R' [20s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 32 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test.R:183:7'): same loss ─────────────────────────────────────────
abs(a - b) < 0.001 is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 32 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-x86_64
Current CRAN status: ERROR: 8, NOTE: 2, OK: 3
Version: 1.0.3
Check: examples
Result: ERROR
Running examples in ‘transreg-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.transreg
> ### Title: Plot transreg-object
> ### Aliases: plot.transreg
>
> ### ** Examples
>
> #--- simulation ---
> set.seed(1)
> n <- 100; p <- 500
> X <- matrix(rnorm(n=n*p),nrow=n,ncol=p)
> beta <- rnorm(p) #*rbinom(n=n,size=1,prob=0.2)
> prior1 <- beta + rnorm(p)
> prior2 <- beta + rnorm(p)
> prior3 <- rnorm(p)
> prior4 <- rnorm(p)
> y <- X %*% beta
>
> prior <- cbind(prior1,prior2,prior3,prior4)
> object <- transreg(y=y,X=X,prior=prior,alpha=0,stack=c("sta","sim"))
>
> plot(object,stack="sta")
Error in .subscript.2ary(x, i, j, drop = TRUE) : subscript out of bounds
Calls: plot ... eval -> eval -> .coef.sta -> [ -> [ -> .subscript.2ary
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64
Version: 1.0.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [28s/36s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(transreg)
>
> testthat::test_check(package="transreg",stop_on_warning=FALSE)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:56:5'): (code run outside of `test_that()`) ──────────────────
Error in `.subscript.2ary(x, i, j, drop = TRUE)`: subscript out of bounds
Backtrace:
▆
1. ├─stats::coef(object = object) at test.R:56:5
2. └─transreg:::coef.transreg(object = object)
3. ├─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
4. │ └─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
5. └─transreg:::.coef.sta(object = object, ...)
6. ├─beta["(Intercept)", "s2"]
7. └─beta["(Intercept)", "s2"]
8. └─Matrix:::.subscript.2ary(x, i, j, drop = TRUE)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.0.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [18s/21s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(transreg)
>
> testthat::test_check(package="transreg",stop_on_warning=FALSE)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:56:5'): (code run outside of `test_that()`) ──────────────────
Error in `.subscript.2ary(x, i, j, drop = TRUE)`: subscript out of bounds
Backtrace:
▆
1. ├─stats::coef(object = object) at test.R:56:5
2. └─transreg:::coef.transreg(object = object)
3. ├─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
4. │ └─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
5. └─transreg:::.coef.sta(object = object, ...)
6. ├─beta["(Intercept)", "s2"]
7. └─beta["(Intercept)", "s2"]
8. └─Matrix:::.subscript.2ary(x, i, j, drop = TRUE)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.3
Check: examples
Result: ERROR
Running examples in ‘transreg-Ex.R’ failed
The error most likely occurred in:
> ### Name: plot.transreg
> ### Title: Plot transreg-object
> ### Aliases: plot.transreg
>
> ### ** Examples
>
> #--- simulation ---
> set.seed(1)
> n <- 100; p <- 500
> X <- matrix(rnorm(n=n*p),nrow=n,ncol=p)
> beta <- rnorm(p) #*rbinom(n=n,size=1,prob=0.2)
> prior1 <- beta + rnorm(p)
> prior2 <- beta + rnorm(p)
> prior3 <- rnorm(p)
> prior4 <- rnorm(p)
> y <- X %*% beta
>
> prior <- cbind(prior1,prior2,prior3,prior4)
> object <- transreg(y=y,X=X,prior=prior,alpha=0,stack=c("sta","sim"))
>
> plot(object,stack="sta")
Error in .subscript.2ary(x, i, j, drop = TRUE) : subscript out of bounds
Calls: plot ... eval -> eval -> .coef.sta -> [ -> [ -> .subscript.2ary
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 1.0.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [40s/118s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(transreg)
>
> testthat::test_check(package="transreg",stop_on_warning=FALSE)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:56:5'): (code run outside of `test_that()`) ──────────────────
Error in `.subscript.2ary(x, i, j, drop = TRUE)`: subscript out of bounds
Backtrace:
▆
1. ├─stats::coef(object = object) at test.R:56:5
2. └─transreg:::coef.transreg(object = object)
3. ├─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
4. │ └─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
5. └─transreg:::.coef.sta(object = object, ...)
6. ├─beta["(Intercept)", "s2"]
7. └─beta["(Intercept)", "s2"]
8. └─Matrix:::.subscript.2ary(x, i, j, drop = TRUE)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [41s/44s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(transreg)
>
> testthat::test_check(package="transreg",stop_on_warning=FALSE)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:56:5'): (code run outside of `test_that()`) ──────────────────
Error in `.subscript.2ary(x, i, j, drop = TRUE)`: subscript out of bounds
Backtrace:
▆
1. ├─stats::coef(object = object) at test.R:56:5
2. └─transreg:::coef.transreg(object = object)
3. ├─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
4. │ └─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
5. └─transreg:::.coef.sta(object = object, ...)
6. ├─beta["(Intercept)", "s2"]
7. └─beta["(Intercept)", "s2"]
8. └─Matrix:::.subscript.2ary(x, i, j, drop = TRUE)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.0.3
Check: tests
Result: ERROR
Running 'testthat.R' [19s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(transreg)
>
> testthat::test_check(package="transreg",stop_on_warning=FALSE)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:56:5'): (code run outside of `test_that()`) ──────────────────
Error in `.subscript.2ary(x, i, j, drop = TRUE)`: subscript out of bounds
Backtrace:
▆
1. ├─stats::coef(object = object) at test.R:56:5
2. └─transreg:::coef.transreg(object = object)
3. ├─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
4. │ └─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
5. └─transreg:::.coef.sta(object = object, ...)
6. ├─beta["(Intercept)", "s2"]
7. └─beta["(Intercept)", "s2"]
8. └─Matrix:::.subscript.2ary(x, i, j, drop = TRUE)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
Error: Test failures
Execution halted
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64
Version: 1.0.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [26s/31s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(transreg)
>
> testthat::test_check(package="transreg",stop_on_warning=FALSE)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:56:5'): (code run outside of `test_that()`) ──────────────────
Error in `.subscript.2ary(x, i, j, drop = TRUE)`: subscript out of bounds
Backtrace:
▆
1. ├─stats::coef(object = object) at test.R:56:5
2. └─transreg:::coef.transreg(object = object)
3. ├─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
4. │ └─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
5. └─transreg:::.coef.sta(object = object, ...)
6. ├─beta["(Intercept)", "s2"]
7. └─beta["(Intercept)", "s2"]
8. └─Matrix:::.subscript.2ary(x, i, j, drop = TRUE)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
Error: Test failures
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.0.3
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘fwelnet’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.0.3
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'fwelnet', 'doMC'
Flavor: r-oldrel-windows-x86_64
Version: 1.0.3
Check: tests
Result: ERROR
Running 'testthat.R' [28s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(transreg)
>
> testthat::test_check(package="transreg",stop_on_warning=FALSE)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:56:5'): (code run outside of `test_that()`) ──────────────────
Error in `.subscript.2ary(x, i, j, drop = TRUE)`: subscript out of bounds
Backtrace:
▆
1. ├─stats::coef(object = object) at test.R:56:5
2. └─transreg:::coef.transreg(object = object)
3. ├─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
4. │ └─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
5. └─transreg:::.coef.sta(object = object, ...)
6. ├─beta["(Intercept)", "s2"]
7. └─beta["(Intercept)", "s2"]
8. └─Matrix:::.subscript.2ary(x, i, j, drop = TRUE)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-x86_64