[R-sig-phylo] 'tip labels not unique' in different versions of MCMCglmm and ape??

Phillimore, Albert albert.phillimore at imperial.ac.uk
Wed Feb 15 12:27:43 CET 2012


Hi Thomas,

I just ran the problem you mentioned past Jarrod Hadfield and he replied:

"I think the actual error message is "phylogeny tip/node labels are not
unique" rather than "Tip labels not unique. Does,

any(duplicated(SppPHYLO$node.label)))  

return true. If so, you could delete the node labels. The change across
versions is because I did not realise that ape would allow non-unique node labels."

Hope this sorts it.

Cheers
Ally



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