[R-sig-ME] [EXT] Re: partial effects plots

[Ben Bolker]

   OK, in this case you'll need to be able to generate partial 
residuals, which may be doable via the package at 
https://github.com/hohenstein/remef

On 7/30/24 16:30, Daniel Lüdecke wrote:
> I'm not sure if the partial effects plots differ from what emmeans, ggeffects, effects etc. plot by default.
> Isn't another name for "partial effects plots" the "added variables plot", implemented in car::avPlot() / car::avPlots()?
>
> Not sure if mixed models are supported, though.
>
> -----Ursprüngliche Nachricht-----
> Von: R-sig-mixed-models <r-sig-mixed-models-bounces using r-project.org> Im Auftrag von Ben Bolker
> Gesendet: Dienstag, 30. Juli 2024 22:18
> An: r-sig-mixed-models using r-project.org
> Betreff: [EXT] Re: [R-sig-ME] partial effects plots
>
>     Start with emmeans or effects packages? In particular
>
> library(effects)
>
> plot(allEffects(fitted_model))
>
> On 7/30/24 15:44, Lee, Laura M via R-sig-mixed-models wrote:
>> Hello all,
>>
>> I have fit a GLMM to presence/absence data (family = binomial) from an acoustic telemetry study. I have five fixed effects-Year (a factor), Day of Year, Hour of Day, Sex (a factor), and water temperature-and one random effect-Fish ID (a factor). I am looking to create partial effects plots for the covariates. Can anyone direct me to some sample code or suggest a package to help me get started. My Google searches haven't been very fruitful.
>>
>> I would appreciate any assistance on this matter. Thank you for your time!
>>
>>
>> Best,
>>
>> Laura
>>
>>
>> #############################
>> Laura M. Lee
>> USFWS - Northeast Fishery Center
>> P.O. Box 75
>> 308 Washington Ave.
>> Lamar, PA  16848
>> Phone: 570-726-4247 x 50122
>> Laura_Lee using fws.gov<mailto:Laura_Lee using fws.gov>
>> #############################
>>
>>
>>
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>>
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