[R-sig-ME] HGLM object parameters

[J.D. Haltigan]

So in this case, if I want to extract the p > t value from the returned
object, I would need to create a separate object that pulls the summary
list from the object? I usually just run the code for summary to inspect
the values in the data editor, rather than using it to create a 2nd'ary
object.

When I inspect the object manually from within R, for the fixef list, there
are only the intercept + B estimates that I see. What I am doing is
creating a custom function where I need to pull that value for another
dataframe, so it was not immediately clear to me if I could pull that value
directly from the returned object which doesn't seem to include it.

On Wed, Mar 1, 2023 at 9:09 PM Ben Bolker <bbolker using gmail.com> wrote:

>     If this is hglm::hglm(), then Jeff is right.  From the examples:
>
>
> library(hglm)
>
> data(semiconductor)
> m11 <- hglm(fixed = y ~ x1 + x3 + x5 + x6,
>                   random = ~ 1|Device,
>                   family = Gamma(link = log),
>                   disp = ~ x2 + x3, data = semiconductor)
>
> s <- summary(m11)
>
> s$FixCoefMat
>                Estimate Std. Error    t-value     Pr(>|t|)
> (Intercept) -4.7116845 0.06695731 -70.368491 3.009494e-53
> x1           0.2097871 0.06638132   3.160333 2.627136e-03
> x3           0.3289347 0.06695731   4.912604 9.343313e-06
> x5          -0.1731428 0.06638132  -2.608306 1.185092e-02
> x6          -0.3569009 0.06633464  -5.380311 1.796667e-06
>
>    If this is a different HGLM package you'll have to specify ...
>
> On 2023-03-01 8:58 p.m., Jeff Newmiller wrote:
> > No idea in this specific case, but normally such information is stored
> in the object you get back from the summary function when you give it the
> HGLM model object. Look at ?summary.HGLM.
> >
> > On March 1, 2023 5:48:56 PM PST, "J.D. Haltigan" <jhaltiga using gmail.com>
> wrote:
> >> Sent this request for information to the listed maintainer of the
> package,
> >> but have not heard back and was wondering if anyone else might be able
> to
> >> confirm:
> >>
> >> In the returned class object of HGLM, is the pr > t value stored
> anywhere
> >> in the fixed effect list of values? I don't see it, but perhaps I am
> >> missing its location elsewhere in the returned object.
> >>
> >> Thanks in advance for any insight.
> >>
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> >>
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