[R-sig-ME] Error in reS$ziReStruc[[i]]

Ben Bolker bbolker @ending from gm@il@com
Sun Aug 19 17:52:54 CEST 2018


  This seems like a permissions problem.  As

 https://github.com/satijalab/seurat/issues/94

says, try running as administrator? (i.e., run R as administrator, then
run install_github(...) within that session

On 2018-08-19 10:45 AM, C. AMAL D. GLELE wrote:
> Hi, dear Mollie.
> When installing from Github  "
> devtools::install_github("glmmTMB/glmmTMB/glmmTMB")";
> I've encountered several errors that I corrected; but I do not have a
> solution for the last
> one (pasted below) yet:
> "Installation failed: Cannot change working directory"
> In advance thanks.
> All the best.
> Amal
> 
> 2018-08-13 20:34 GMT+02:00 Mollie Brooks <mollieebrooks using gmail.com>:
> 
>> I think this bug was fixed in the development version (
>> https://github.com/glmmTMB/glmmTMB/issues/370). It might still be in the
>> CRAN version.
>>
>> Install from Github and it should work. https://github.com/glmmTMB/glmmTMB
>>
>> Cheers,
>> Mollie
>>
>> On 13Aug 2018, at 15:11, C. AMAL D. GLELE <altessedac2 using gmail.com> wrote:
>>
>> Hi, dear all.
>> I've built a glmm (model) with glmmTMB; it had fitted without,  neither
>> error message, nor warnings;
>> but, since I've added the following ziformula=~village (village is a 6
>> levels grouping factor variable), I got the warning message
>> "Model convergence problem; non-positive-definite Hessian matrix"
>> Trying to resolve this, I've used ziformula=~(1|village) instead;
>> then, the model fits without neither error message, nor warnings; but when
>> I'd ran "summary(model)", I got the following error message "Error in
>> reS$ziReStruc[[i]] : subscript out of bounds": it's my first time to get
>> such an error message and I don't know any idea about its possible cause;
>> so, any help to solve it will be much appreciated.
>> In advance, thanks.
>> Kind regards,
>>
>> [[alternative HTML version deleted]]
>>
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>>
> 
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