[R-sig-ME] nlme issue

Thierry Onkelinx thierry.onkelinx at inbo.be
Tue Jul 18 14:43:58 CEST 2017


Dear Raymond,

I would recommend to contact the maintainers of those packages. Maybe
something changed in nlme and did not percolate into those packages.

Best regards,

ir. Thierry Onkelinx
Instituut voor natuur- en bosonderzoek / Research Institute for Nature and
Forest
team Biometrie & Kwaliteitszorg / team Biometrics & Quality Assurance
Kliniekstraat 25
1070 Anderlecht
Belgium

To call in the statistician after the experiment is done may be no more
than asking him to perform a post-mortem examination: he may be able to say
what the experiment died of. ~ Sir Ronald Aylmer Fisher
The plural of anecdote is not data. ~ Roger Brinner
The combination of some data and an aching desire for an answer does not
ensure that a reasonable answer can be extracted from a given body of data.
~ John Tukey

2017-07-18 0:15 GMT+02:00 Chiruka, Raymond <RChiruka op ufh.ac.za>:

> Good day
>
> I am using R 3.4.1 on Rstudio on windows
> I was trying the examples for fitting sitar growth models.I am getting the
> following error when run  examples in package sitar and package gmusim.
>
> The code I tried is the following.
>
> > library("gmusim", lib.loc="C:/Users/RChiruka/Documents/R/rpackages")
> Loading required package: lattice
> Loading required package: nlme
> Loading required package: splines
>
> I get the following error.
>
>
> > x <- immigrant$age
>
> > y <- immigrant$height
>
> > id <- immigrant$id
>
> > df <- 5
>
> > resu1 <- gmusim(x,y,id,df)
>
> Error in pdFactor.pdLogChol(X[[i]], ...) : object 'logChol_pd' not found
>
>
>
>
>
> When I tried running the following sitar example I got the same error
>
>
>
> > library("sitar", lib.loc="C:/Users/RChiruka/Documents/R/rpackages")
>
> > data(heights)
>
> > (m1 <- sitar(x=age, y=height, id=id, data=heights, df=5))
>
> Error in pdFactor.pdLogChol(X[[i]], ...) : object 'logChol_pd' not found
>
> > m1 <- sitar(x=age, y=height, id=id, data=heights, df=7)
>
> Error in pdFactor.pdLogChol(X[[i]], ...) : object 'logChol_pd' not found
>
>
>
> I don't know what is wrong. Any help would be appreciated.
>
>
>
>
>
> Regards
>
>
>
> Raymond
>
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