[R-sig-ME] Plotting effects in original units

Mariano Devoto mdevoto at agro.uba.ar
Fri Feb 12 12:59:54 CET 2016

Hi everyone. I am using 'glmer' function in lme4 package to run a glmm with
rescaled explanatory variables (i.e. I used 'scale' function to centre and
standardise each variable). I am now trying to use the output of the
'allEffects' function in the 'effects' package to calculate and plot the
effects. For each explanatory variable I want to extract the fitted values
(and the confidence interval) and plot them but labeling the axes in the
original units. I don't want to use the default plot function because I am
trying to make custom-made figures. Is there a way around having to use the
inverse of the link function and then backtransforming using the inverse of
the scaling to get the values I am looking for? I'd appreciate any tips.



Dr. Mariano Devoto
Investigador Adjunto del CONICET
Cátedra de Botánica General
Facultad de Agronomía de la U.B.A.
Av. San Martin 4453
C.A. de Buenos Aires


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